TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= query SelS_C.intestinalis.fa
         (204 letters)

Database: N.gruberi/genome.fa 
           784 sequences; 40,964,085 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|GG738845.1| Naegleria gruberi genomic scaffold NAEGRscaffold_...    47   1e-05
gb|GG738887.1| Naegleria gruberi genomic scaffold NAEGRscaffold_...    35   0.046
gb|GG738876.1| Naegleria gruberi genomic scaffold NAEGRscaffold_...    35   0.046
gb|GG738875.1| Naegleria gruberi genomic scaffold NAEGRscaffold_...    35   0.046
gb|GG738846.1| Naegleria gruberi genomic scaffold NAEGRscaffold_...    34   0.078
gb|GG738867.1| Naegleria gruberi genomic scaffold NAEGRscaffold_...    33   0.17 
gb|GG738916.1| Naegleria gruberi genomic scaffold NAEGRscaffold_...    32   0.39 
gb|GG739375.1| Naegleria gruberi genomic scaffold NAEGRscaffold_...    32   0.51 
gb|GG738868.1| Naegleria gruberi genomic scaffold NAEGRscaffold_...    32   0.51 
gb|GG738885.1| Naegleria gruberi genomic scaffold NAEGRscaffold_...    31   0.66 
gb|GG738873.1| Naegleria gruberi genomic scaffold NAEGRscaffold_...    31   0.66 
gb|GG738870.1| Naegleria gruberi genomic scaffold NAEGRscaffold_...    31   0.66 
gb|GG738854.1| Naegleria gruberi genomic scaffold NAEGRscaffold_...    31   0.66 
gb|GG738852.1| Naegleria gruberi genomic scaffold NAEGRscaffold_...    31   0.86 
gb|GG738847.1| Naegleria gruberi genomic scaffold NAEGRscaffold_...    31   0.86 
gb|GG738907.1| Naegleria gruberi genomic scaffold NAEGRscaffold_...    30   1.1  
gb|GG738888.1| Naegleria gruberi genomic scaffold NAEGRscaffold_...    30   1.5  
gb|GG738883.1| Naegleria gruberi genomic scaffold NAEGRscaffold_...    30   1.5  
gb|GG738863.1| Naegleria gruberi genomic scaffold NAEGRscaffold_...    30   1.5  
gb|GG738856.1| Naegleria gruberi genomic scaffold NAEGRscaffold_...    30   1.5  
gb|GG738925.1| Naegleria gruberi genomic scaffold NAEGRscaffold_...    30   1.9  
gb|GG738889.1| Naegleria gruberi genomic scaffold NAEGRscaffold_...    30   1.9  
gb|GG738866.1| Naegleria gruberi genomic scaffold NAEGRscaffold_...    30   1.9  
gb|GG738855.1| Naegleria gruberi genomic scaffold NAEGRscaffold_...    30   1.9  
gb|GG739363.1| Naegleria gruberi genomic scaffold NAEGRscaffold_...    29   3.3  
gb|GG738930.1| Naegleria gruberi genomic scaffold NAEGRscaffold_...    29   3.3  
gb|GG738909.1| Naegleria gruberi genomic scaffold NAEGRscaffold_...    29   3.3  
gb|GG738906.1| Naegleria gruberi genomic scaffold NAEGRscaffold_...    29   3.3  
gb|GG738901.1| Naegleria gruberi genomic scaffold NAEGRscaffold_...    29   3.3  
gb|GG738897.1| Naegleria gruberi genomic scaffold NAEGRscaffold_...    29   3.3  
gb|GG738871.1| Naegleria gruberi genomic scaffold NAEGRscaffold_...    28   4.3  
gb|GG738848.1| Naegleria gruberi genomic scaffold NAEGRscaffold_...    28   4.3  
gb|GG738865.1| Naegleria gruberi genomic scaffold NAEGRscaffold_...    28   5.6  
gb|GG738851.1| Naegleria gruberi genomic scaffold NAEGRscaffold_...    28   5.6  
gb|GG738910.1| Naegleria gruberi genomic scaffold NAEGRscaffold_...    28   7.3  
gb|GG739004.1| Naegleria gruberi genomic scaffold NAEGRscaffold_...    27   9.5  
gb|GG738969.1| Naegleria gruberi genomic scaffold NAEGRscaffold_...    27   9.5  
gb|GG738913.1| Naegleria gruberi genomic scaffold NAEGRscaffold_...    27   9.5  
gb|GG738908.1| Naegleria gruberi genomic scaffold NAEGRscaffold_...    27   9.5  
gb|GG738853.1| Naegleria gruberi genomic scaffold NAEGRscaffold_...    27   9.5  

>gb|GG738845.1| Naegleria gruberi genomic scaffold NAEGRscaffold_1, whole genome
             shotgun sequence
          Length = 1555553

 Score = 47.0 bits (110), Expect = 1e-05
 Identities = 36/132 (27%), Positives = 62/132 (46%), Gaps = 9/132 (6%)
 Frame = +2

Query: 66    KSVKNLFGRRKTYYDDTENMTPEQVEARSVAM----ERARKKLQDRHDAAAREHEER--L 119
             K  K  F R K+  D  +    E+ E + VA+    ER RKK ++  +   +E EER   
Sbjct: 69758 KKRKEEFERLKSEQDKRKQQKKEEWETKRVAIIEEIERRRKKEEEEREIRRKEEEERKKK 69937

Query: 120   REQEEQKRMQKINDHDALKAGKTQSKTSKKLDQKPDPN---QATQSHIKRNKESKPLRSS 176
             REQE ++  +K +++D ++  K +    ++ +++ +     Q  Q   K+      L S 
Sbjct: 69938 REQEMEEERKKKDEYDRIQRQKDEEYYQRQKEKQAEIEKRLQGQQQTPKKQDRWGGLDSE 70117

Query: 177   DFSPLGGGPSNS 188
               SP GG   +S
Sbjct: 70118 SSSPFGGAKKSS 70153



 Score = 33.1 bits (74), Expect = 0.17
 Identities = 25/113 (22%), Positives = 55/113 (48%), Gaps = 14/113 (12%)
 Frame = -1

Query: 63      NIEKSVKNLFGRRKTYY------DDTENMTPEQVEARSVAMERARKKLQDRHDAAAREHE 116
               N+EKS+K    +++         ++ EN T E++ + +  +E+A +  ++ +    +E  
Sbjct: 1410044 NLEKSIKTASTKKEEILSQIQELENDENNTNEEIVSLAPELEKATQVCEELYSECKKEIA 1409865

Query: 117     ERLREQE-EQKRM-------QKINDHDALKAGKTQSKTSKKLDQKPDPNQATQ 161
               +  +++E +QK +        KIN+  ++K    +  TSK+   K D  +  Q
Sbjct: 1409864 DLSKQKETKQKELAPFKQKENKINEDISVKQSTIELLTSKRNSSKTDLERKKQ 1409706



 Score = 29.6 bits (65), Expect = 1.9
 Identities = 22/111 (19%), Positives = 48/111 (43%)
 Frame = +3

Query: 69     KNLFGRRKTYYDDTENMTPEQVEARSVAMERARKKLQDRHDAAAREHEERLREQEEQKRM 128
              K +  ++ +   D+ + +  + E +  A++    K     D+++   +E +++ +  +  
Sbjct: 875652 KPIVTKKDSSSSDSSDSSSSEDEKKKPAIKPTVTKKDSSSDSSSDSSDEEMKDAKPTQTK 875831

Query: 129    QKINDHDALKAGKTQSKTSKKLDQKPDPNQATQSHIKRNKESKPLRSSDFS 179
                I+  D+  +  + S   +K   KP    A QS     K+S    SSD S
Sbjct: 875832 PAISKKDSSSSDSSDSSEDEK---KPVSKPAVQSKPVTKKDSSSDSSSDSS 875975



 Score = 29.3 bits (64), Expect = 2.5
 Identities = 20/100 (20%), Positives = 40/100 (40%)
 Frame = +3

Query: 80     DDTENMTPEQVEARSVAMERARKKLQDRHDAAAREHEERLREQEEQKRMQKINDHDALKA 139
              DD +  TP+  E + V     +K   D  D+++   E+  +   +  + + +   D+   
Sbjct: 875976 DDEKKPTPKPTETKQVI---TKKDSSDSSDSSSDSSEDEKKPVSKPIQPKPVTKKDSSSD 876146

Query: 140    GKTQSKTSKKLDQKPDPNQATQSHIKRNKESKPLRSSDFS 179
                + S +  +    P P +      K++  S    SSD S
Sbjct: 876147 SDSSSSSEDEKKPTPKPTETKPVITKKDSSSDSDSSSDSS 876266



 Score = 28.9 bits (63), Expect = 3.3
 Identities = 18/98 (18%), Positives = 46/98 (46%)
 Frame = -1

Query: 70      NLFGRRKTYYDDTENMTPEQVEARSVAMERARKKLQDRHDAAAREHEERLREQEEQKRMQ 129
               NL     T  +DT     E  E   +    A +++ + ++   R+H   L E++E +  +
Sbjct: 1117781 NLKKMEPTTDEDTHISANEDPEETLMVDNSAEEEMTEENENENRDHGTPLIEEDENQEGE 1117602

Query: 130     KINDHDALKAGKTQSKTSKKLDQKPDPNQATQSHIKRN 167
               + +D +  + G  + + ++++ ++ DP    + + + N
Sbjct: 1117601 EADDEENQQYG--EEEDNQEVHEEEDPENDGEENDEEN 1117494


>gb|GG738887.1| Naegleria gruberi genomic scaffold NAEGRscaffold_43, whole genome shotgun
              sequence
          Length = 508457

 Score = 35.0 bits (79), Expect = 0.046
 Identities = 25/99 (25%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
 Frame = +2

Query: 74     RRKTYYDDTENMTPEQVEARSVAME--RARKKLQDRHDAAAREHEERLREQEEQKRMQKI 131
              RRK    + E    E+ EAR    E     +K ++  +   +E EE+ R++EE++R +K+
Sbjct: 258812 RRKVAEAEREKKEAEEREARRKEREERERERKRKEEEEKKRKEEEEKKRQKEEEERKKKL 258991

Query: 132    NDHDALKAGKTQSKTSKKL--DQKPDPNQATQSHIKRNK 168
                    KA +   K   +L  + +   NQ  ++   ++K
Sbjct: 258992 EAEMKKKAEEEAEKERLRLLAEAEQTKNQLKEAFNAKHK 259108



 Score = 34.7 bits (78), Expect = 0.060
 Identities = 24/99 (24%), Positives = 48/99 (48%), Gaps = 3/99 (3%)
 Frame = +2

Query: 79     YDDTENMTPEQ--VEARSVAMERARKKLQ-DRHDAAAREHEERLREQEEQKRMQKINDHD 135
              Y +   MTP +  V A  + ++  RK  + +R    A E E R +E+EE++R +K  + +
Sbjct: 258743 YGEETGMTPAKIIVGAARIDIKNRRKVAEAEREKKEAEEREARRKEREERERERKRKEEE 258922

Query: 136    ALKAGKTQSKTSKKLDQKPDPNQATQSHIKRNKESKPLR 174
                K  + + K  +K +++       +   K  +E++  R
Sbjct: 258923 EKKRKEEEEKKRQKEEEERKKKLEAEMKKKAEEEAEKER 259039



 Score = 27.7 bits (60), Expect = 7.3
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = +2

Query: 84     NMTPEQVEARSVAMERARKKLQDRHDAAAREHEERLRE 121
              N+TPE+ +    A+    + L+D  DA   E EE+ RE
Sbjct: 259493 NLTPEERKELEQAVAEMEQWLRDHPDATKEEIEEKERE 259606


>gb|GG738876.1| Naegleria gruberi genomic scaffold NAEGRscaffold_32, whole genome shotgun
              sequence
          Length = 396977

 Score = 35.0 bits (79), Expect = 0.046
 Identities = 20/67 (29%), Positives = 38/67 (56%)
 Frame = -1

Query: 85     MTPEQVEARSVAMERARKKLQDRHDAAAREHEERLREQEEQKRMQKINDHDALKAGKTQS 144
              + PE  E   +  +R RK+ ++R     R+ EER ++++EQK++++IN   A+      +
Sbjct: 205931 VNPEMEE--KIRADRGRKEEEERQ---RRKEEERKKKEDEQKKLEEINQQPAMIEKNLGN 205767

Query: 145    KTSKKLD 151
              +  KK D
Sbjct: 205766 EYYKKKD 205746


>gb|GG738875.1| Naegleria gruberi genomic scaffold NAEGRscaffold_31, whole genome shotgun
              sequence
          Length = 396166

 Score = 35.0 bits (79), Expect = 0.046
 Identities = 30/113 (26%), Positives = 51/113 (45%)
 Frame = -1

Query: 29     PYVMMSVFNQGLAFLQAYGWFLLFGFVAAMFVWTNIEKSVKNLFGRRKTYYDDTENMTPE 88
              PY+  S F   +    +     L  +V AM  + N+EK V+    R +           E
Sbjct: 100708 PYINYSFFTYDIIKSSSSAASNLCTWVRAMAEYHNVEKEVRPKRERLR-----------E 100562

Query: 89     QVEARSVAMERARKKLQDRHDAAAREHEERLREQEEQKRMQKINDHDALKAGK 141
                E  ++A  +  KK+++ +   A E EE+ R  EE+ R +++ + DA K  K
Sbjct: 100561 AEETLAIATAQLNKKMEELNKVIA-EFEEKQRVFEEETRKKELLEEDAEKTRK 100406



 Score = 28.5 bits (62), Expect = 4.3
 Identities = 21/108 (19%), Positives = 48/108 (44%)
 Frame = -3

Query: 64     IEKSVKNLFGRRKTYYDDTENMTPEQVEARSVAMERARKKLQDRHDAAAREHEERLREQE 123
              + + + N F ++      ++N            M R R     +  +  R+HEE     +
Sbjct: 231518 LARVISNNFKKKSLNKKVSKNSAENS*TINHYQMPRTRSSTTKKQ-STKRKHEETSTSDD 231342

Query: 124    EQKRMQKINDHDALKAGKTQSKTSKKLDQKPDPNQATQSHIKRNKESK 171
               + +++KIN++   K  + +    +++D +   NQAT +  K +K+ +
Sbjct: 231341 SEIKIRKINNN---KKNRDEG-DDEEIDNQSVDNQATTTKKKESKKDR 231210


>gb|GG738846.1| Naegleria gruberi genomic scaffold NAEGRscaffold_2, whole genome shotgun
              sequence
          Length = 1001995

 Score = 34.3 bits (77), Expect = 0.078
 Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
 Frame = +2

Query: 80     DDTENMTPEQVEARSVAMERARKKLQDRHDAAAREHEERLREQEEQKRMQKIND-HDALK 138
              DD+E+   E+ E +    +  +K  +  +D    EH+E    +EEQ+  ++  +   A K
Sbjct: 239897 DDSEDEDEEEYEPQKKKKKTVKKAAETHNDE--EEHQEEAPAEEEQEPEEEPEEKKPAKK 240070

Query: 139    AGKTQSKTSKKLDQK 153
              + K   KT KK ++K
Sbjct: 240071 SSKKSEKTEKKSEKK 240115



 Score = 30.4 bits (67), Expect = 1.1
 Identities = 27/113 (23%), Positives = 48/113 (42%), Gaps = 7/113 (6%)
 Frame = -2

Query: 96     AMERARKKLQDRHDAAAREHEERLREQEEQKRMQKINDHD----ALKAGKTQSKTSKKLD 151
              A ++ +KK + + DA+A            +KR  + ND+D    + K  K  S +S    
Sbjct: 249930 AKKKKKKKKKKQSDASATPAVVTPPNNSSKKRKNQ-NDNDIAQPSSKKSKKSSDSSATTQ 249754

Query: 152    QKPDPNQATQSHIKRNKESKPL---RSSDFSPLGGGPSNSARWRPGNSRPSAG 201
                P P++ ++     +K SKPL   + S  +     P +       ++ PS G
Sbjct: 249753 VAPQPSKKSKQSSDSSKPSKPLVAAQQSKKAKKSSAPPSKPPVAESSTNPSQG 249595


>gb|GG738867.1| Naegleria gruberi genomic scaffold NAEGRscaffold_23, whole genome shotgun
              sequence
          Length = 424055

 Score = 33.1 bits (74), Expect = 0.17
 Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 7/104 (6%)
 Frame = +1

Query: 80     DDTENMTPEQVE-ARSVAMERARKKLQDRHDAAAREHEERLREQEEQKRMQKINDHDALK 138
              ++   M  E+VE AR  A+ RA++K + +     +E EE  +++E +K  ++     A K
Sbjct: 138415 EERRRMEEERVEEARRKALLRAKEK-KRKEIEREKEMEEERKKREAEKWRKRDEGLMAFK 138591

Query: 139    AGKTQSKTSKKLD---QKPD-PNQATQ--SHIKRNKESKPLRSS 176
                K + +  KK+D    KP  P QA Q     ++NKE+KP  +S
Sbjct: 138592 L-KQEMEKEKKMDVRTSKPTMPQQAPQIIKPKQQNKEAKPSTTS 138720


>gb|GG738916.1| Naegleria gruberi genomic scaffold NAEGRscaffold_72, whole genome
             shotgun sequence
          Length = 245038

 Score = 32.0 bits (71), Expect = 0.39
 Identities = 27/109 (24%), Positives = 46/109 (42%), Gaps = 2/109 (1%)
 Frame = -1

Query: 93    RSVAMERARKKLQDRHDAAAREHEERLREQEEQKRMQK--INDHDALKAGKTQSKTSKKL 150
             R      ++   +++ D   ++ E   +  +E     K  +ND+   K  +T  +  KKL
Sbjct: 59002 RDAVYNLSKASSKEQRDTLIKKAESAYKGAKENISFAKDDLNDYTGNKK-RTFQQELKKL 58826

Query: 151   DQKPDPNQATQSHIKRNKESKPLRSSDFSPLGGGPSNSARWRPGNSRPS 199
             +Q    N A  + IK N+E  P   S        P+NS     GN +P+
Sbjct: 58825 EQSVSKNYADLTQIKENRE--PAAGS------ASPANSTTSSSGNRKPT 58703


>gb|GG739375.1| Naegleria gruberi genomic scaffold NAEGRscaffold_901, whole genome
            shotgun sequence
          Length = 1581

 Score = 31.6 bits (70), Expect = 0.51
 Identities = 19/77 (24%), Positives = 34/77 (44%)
 Frame = +3

Query: 74   RRKTYYDDTENMTPEQVEARSVAMERARKKLQDRHDAAAREHEERLREQEEQKRMQKIND 133
            +  TYY D E +   Q+E         R+ +  R     RE     RE+E Q+ + +   
Sbjct: 951  KASTYYFDYEMLRKLQIEMAVKIQRNVRRWIAKRRADKIREE----REEEFQETIYRAQQ 1118

Query: 134  HDALKAGKTQSKTSKKL 150
             D L++ K Q +  +++
Sbjct: 1119 FDELQSSKKQKEIKRRM 1169


>gb|GG738868.1| Naegleria gruberi genomic scaffold NAEGRscaffold_24, whole genome
             shotgun sequence
          Length = 427589

 Score = 31.6 bits (70), Expect = 0.51
 Identities = 25/100 (25%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
 Frame = +3

Query: 65    EKSVKNLFGRRKTYYDDTENMTPEQVEARSVAMERARKKLQDRHDAA---AREHEERLRE 121
             ++++K    + +   ++ +    E  +      E A KKL+D  +AA   ARE  ER R+
Sbjct: 49701 KRAIKEATRKARQLAEEKKKQAEELAKKLQRDAEAAAKKLRDAVEAAARKAREAAERARQ 49880

Query: 122   QEEQKRMQKINDHDALKAGKTQSKTSKKLDQKPDPNQATQ 161
             Q E  R++      A +  + Q++   KL ++     A Q
Sbjct: 49881 QAENARLK------ATRRARKQAERLAKLAREAAERAAKQ 49982


>gb|GG738885.1| Naegleria gruberi genomic scaffold NAEGRscaffold_41, whole genome shotgun
              sequence
          Length = 362555

 Score = 31.2 bits (69), Expect = 0.66
 Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 6/84 (7%)
 Frame = +1

Query: 91     EARSVAMERARKKLQDRHDAAAREHEERLREQ----EEQKRMQKINDH--DALKAGKTQS 144
              E R    E+  K  +++ +    + EER +EQ    EEQ   QK+N    D  K  + + 
Sbjct: 276451 ERREKLKEQLEKYFKEKEEINQIQEEERKKEQERLKEEQVLTQKLNKERVDFRKNKEFEK 276630

Query: 145    KTSKKLDQKPDPNQATQSHIKRNK 168
                 KK +QK    +A +   + NK
Sbjct: 276631 LEKKKEEQKKREEEALKREAQLNK 276702


>gb|GG738873.1| Naegleria gruberi genomic scaffold NAEGRscaffold_29, whole genome shotgun
              sequence
          Length = 461873

 Score = 31.2 bits (69), Expect = 0.66
 Identities = 21/94 (22%), Positives = 43/94 (45%), Gaps = 12/94 (12%)
 Frame = +1

Query: 91     EARSVAMERARKKLQDRHDAAAREHEERLREQEEQKRMQKINDH-----DALKAGKTQSK 145
              E + V   +  K+ +D  +   +  E +   +++ K   K+++H     + +   KTQ +
Sbjct: 424312 EHKEVKEHKETKEQKDHKEEKKQVKEHKEEPKKQHKEEHKVDEHPVVQKEPVNPKKTQPQ 424491

Query: 146    TSKKLDQKPDPNQATQSHI-------KRNKESKP 172
               S+   Q+P  N   QS+I       ++ K+ KP
Sbjct: 424492 ASEHKQQEPTFNVEEQSNIISTTTTTEKKKKKKP 424593


>gb|GG738870.1| Naegleria gruberi genomic scaffold NAEGRscaffold_26, whole genome shotgun
              sequence
          Length = 418085

 Score = 31.2 bits (69), Expect = 0.66
 Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
 Frame = -1

Query: 65     EKSVKNLFGRRKTYYDDTENMTPEQVEARSVAMERARKKLQD-RHDAAAREHEERLREQE 123
              E  VK L         D E +   ++E      E   K+L D + +   +  EER R+QE
Sbjct: 293198 EHIVKGLDWLSSQIEKDLETLC-SRIEKEEKEFEDEEKRLADEKWERVRKMREERARQQE 293022

Query: 124    EQKRMQKINDHDALKAGKTQSK 145
              E++R +K  + D  K+ K  +K
Sbjct: 293021 EEERKKKEQEEDE-KSSKKSNK 292959



 Score = 28.1 bits (61), Expect = 5.6
 Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
 Frame = +1

Query: 143    QSKTSKKLDQ-KPDPNQATQSHIKRNKESKPLRSSDFS 179
              Q +T+ + +Q +P  N+  +  I +NK++KPL S D S
Sbjct: 176347 QVETTAEAEQAEPLENEGNEHQIDQNKQTKPLTSYDLS 176460



 Score = 28.1 bits (61), Expect = 5.6
 Identities = 20/83 (24%), Positives = 39/83 (46%)
 Frame = -1

Query: 98     ERARKKLQDRHDAAAREHEERLREQEEQKRMQKINDHDALKAGKTQSKTSKKLDQKPDPN 157
              E A +   D  +A A++ E R+   +++    KI  ++ +  G    KTS+  +++ D  
Sbjct: 229394 EEAFEDFDDEEEAEAKKVETRVLSTKDES--VKIVGNEIVIDGFAPKKTSEGSEKQVDSK 229221

Query: 158    QATQSHIKRNKESKPLRSSDFSP 180
              + T +  K    +    SSD+ P
Sbjct: 229220 KKTVASQKARGTNPFTESSDYDP 229152


>gb|GG738854.1| Naegleria gruberi genomic scaffold NAEGRscaffold_10, whole genome
             shotgun sequence
          Length = 665159

 Score = 31.2 bits (69), Expect = 0.66
 Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
 Frame = -1

Query: 101   RKKLQDRHDAAAREHEERLREQEEQ-----KRMQKINDHDALKAGKTQSKTSKKLDQKPD 155
             RKK + + D++  +HEE  R+QEE+     + + ++ D    K  KT+ K  KK D    
Sbjct: 93227 RKKAKTKADSSD-DHEEEERKQEEEVEEDDRVVIEVEDDSDYKE-KTKRKRKKKNDDSEK 93054

Query: 156   PNQATQSHIKRNKESKPLRSSD 177
             P        K+NK+S    SS+
Sbjct: 93053 PK-------KKNKKSSASSSSN 93009



 Score = 28.9 bits (63), Expect = 3.3
 Identities = 18/75 (24%), Positives = 34/75 (45%)
 Frame = -3

Query: 105    QDRHDAAAREHEERLREQEEQKRMQKINDHDALKAGKTQSKTSKKLDQKPDPNQATQSHI 164
              +D ++   +  E  LRE E+Q     +  H   K  K + K+++   +KPD +     + 
Sbjct: 464757 EDLYETFEKNVENDLRELEQQ-----VEAHKYPKESKEKPKSAETKKEKPDKDAKDDDYA 464593

Query: 165    KRNKESKPLRSSDFS 179
                + +    R +DFS
Sbjct: 464592 SDSDDEGYSRLTDFS 464548


>gb|GG738852.1| Naegleria gruberi genomic scaffold NAEGRscaffold_8, whole genome shotgun
              sequence
          Length = 938756

 Score = 30.8 bits (68), Expect = 0.86
 Identities = 21/73 (28%), Positives = 44/73 (60%), Gaps = 8/73 (10%)
 Frame = -3

Query: 85     MTPEQVEAR----SVAMERARKKLQDRHDAAAREHEERLREQEEQKRMQK---INDHDAL 137
              MTPEQ++ +       +E+A+ K +DR +   ++  ++L+ +E+QK + +     D + L
Sbjct: 287856 MTPEQIQQQQQQEQEQLEKAKPKRKDRKE---KKKSKKLKREEKQKEVVEDTIEQDEEFL 287686

Query: 138    -KAGKTQSKTSKK 149
               + G+++SK +KK
Sbjct: 287685 AQLGESKSKPTKK 287647


>gb|GG738847.1| Naegleria gruberi genomic scaffold NAEGRscaffold_3, whole genome shotgun
              sequence
          Length = 941567

 Score = 30.8 bits (68), Expect = 0.86
 Identities = 16/82 (19%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
 Frame = -2

Query: 98     ERARKKLQDRHDA--AAREHEERLREQEEQKRMQKINDHDALKAGKTQSKTSKKLDQKPD 155
              E+  KK + + +   + ++HE++  ++ E+K  +K +  +     K + K+  K D+K +
Sbjct: 655099 EKVEKKSEKKSEEKKSEKKHEKKDEKKVEKKEEKKSDKLEKKSEKKEEKKSEHKKDEKKE 654920

Query: 156    PNQATQSHIKRNKESKPLRSSD 177
                ++ +   K++ + K  + S+
Sbjct: 654919 EKKSEKKSEKKDDKKKEEKKSE 654854



 Score = 29.6 bits (65), Expect = 1.9
 Identities = 18/100 (18%), Positives = 50/100 (50%), Gaps = 8/100 (8%)
 Frame = -2

Query: 65     EKSVKNLFGRRKTYYDDTENMTPEQVEARSVAMERARKKLQDRHDAAAREHEERLREQEE 124
              E+S K    ++K   +  E    ++ + +    E+  KK +D+  ++  ++E+   ++++
Sbjct: 656104 EESPKKSEKKKKDKKEKKEKKEKKEKKEKKEKKEKKEKK-KDKKKSSDSDNEDEEPKKKK 655928

Query: 125    QKRMQKINDHDALKAGKTQSKTSKKL--------DQKPDP 156
               K+  K +D +  K  ++ +++  ++        D+KP+P
Sbjct: 655927 SKKSSKSDDEEETKKKESDNESDNEVQEDTHMSDDEKPEP 655808



 Score = 28.5 bits (62), Expect = 4.3
 Identities = 18/49 (36%), Positives = 26/49 (53%)
 Frame = -2

Query: 102    KKLQDRHDAAAREHEERLREQEEQKRMQKINDHDALKAGKTQSKTSKKL 150
              KK ++  +   RE EE+ ++QEE+   +K  DHD L   K      KKL
Sbjct: 785389 KKAKEEEERKKREEEEK-KKQEEKPVEEKKADHDEL*ISKF**NPKKKL 785246



 Score = 28.1 bits (61), Expect = 5.6
 Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
 Frame = -1

Query: 103    KLQDRHDAAA---REHEERLREQEEQKRMQKINDHDALKAGKTQSKTSKK 149
              +L+D+ +  +    +  E LRE+EE+K  +K    DALK  + +  T++K
Sbjct: 817268 RLEDKKETTSWKLADKNELLREREEKKANEKQAKLDALKKSEEKLATAQK 817119



 Score = 27.7 bits (60), Expect = 7.3
 Identities = 27/90 (30%), Positives = 36/90 (40%), Gaps = 1/90 (1%)
 Frame = +2

Query: 83     ENMTPEQVEARSVAMERARKKLQDRHDAAAREHEERLREQEEQKRMQKINDHDALKA-GK 141
              ENM  E V  R   +++    L+ +     RE E       E K   K +   +L   GK
Sbjct: 384896 ENMRQE-VRQREFEVDKVLNYLKHK-----REKEGSRTSNNEGKHKSKTSKAFSLVTHGK 385057

Query: 142    TQSKTSKKLDQKPDPNQATQSHIKRNKESK 171
                S TSKK   K DP +  +   K   E K
Sbjct: 385058 PSSDTSKKAKIKVDPKKKLKPKAKPEVEKK 385147



 Score = 27.7 bits (60), Expect = 7.3
 Identities = 21/96 (21%), Positives = 42/96 (43%)
 Frame = -3

Query: 88     EQVEARSVAMERARKKLQDRHDAAAREHEERLREQEEQKRMQKINDHDALKAGKTQSKTS 147
              + +E    + +++ ++L   H+   +  EERL E      ++ I +    K    Q K  
Sbjct: 295200 DNIEENVSSQKKSIEELFTLHETKLKIFEERLTE------LRDIQERYRRKTAYLQKKFK 295039

Query: 148    KKLDQKPDPNQATQSHIKRNKESKPLRSSDFSPLGG 183
                  QKP+P +   S  +R+++   + S+  S   G
Sbjct: 295038 DLASQKPEPEEEPDSR-ERSRDRIVMSSASSSDTEG 294934


>gb|GG738907.1| Naegleria gruberi genomic scaffold NAEGRscaffold_63, whole genome shotgun
              sequence
          Length = 275174

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 24/111 (21%), Positives = 55/111 (49%), Gaps = 6/111 (5%)
 Frame = -2

Query: 65     EKSVKNL---FGRRKTYYDDTENMTPEQVEARSVAMERA---RKKLQDRHDAAAREHEER 118
              EK ++ L     + K+  D T     +++E     +++    +K+++D H    ++  ++
Sbjct: 158467 EKKIEELNEQLKKAKSSLDQTSQDLKKKLEESEQIVQKLNKEKKQVEDSHSKVVQDLNKK 158288

Query: 119    LREQEEQKRMQKINDHDALKAGKTQSKTSKKLDQKPDPNQATQSHIKRNKE 169
              + EQE  K++Q IN        +T + T  +L++  +  + T S  K+++E
Sbjct: 158287 VEEQE--KKLQSIN-------VETYTATISQLEKNVEQLKLTLSESKQSEE 158162



 Score = 30.4 bits (67), Expect = 1.1
 Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
 Frame = +3

Query: 65     EKSVKNLFGRRKTYYDDTENMTPEQVEARSVAMERARKKLQDRHDAA---AREHEERLRE 121
              +K++K    + +   ++ +    E         E A KKL+D  +AA   ARE  ER R+
Sbjct: 179835 KKAIKEASRKARKIAEEKKRQAEELARKLQRDAEAAAKKLRDAVEAAARKAREAAERARQ 180014

Query: 122    QEEQKRMQ 129
              Q E  +++
Sbjct: 180015 QAENAKLE 180038


>gb|GG738888.1| Naegleria gruberi genomic scaffold NAEGRscaffold_44, whole genome shotgun
              sequence
          Length = 351708

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
 Frame = +2

Query: 108    HDAAAREHEERLREQEEQ-KRMQKINDHDALKAGKTQSKTSKKLDQKPDPNQATQSHIKR 166
              H      H   +R+Q+   KRM K   +      K+Q+K + + DQK  P++  Q + K+
Sbjct: 292553 HPHKYHNHRNLIRKQKVTLKRMMKKK*YYEKLRSKSQNKRNLQTDQKRKPHKGKQKYPKQ 292732

Query: 167    --NKESKPL 173
                N+ S PL
Sbjct: 292733 LPNESSLPL 292759


>gb|GG738883.1| Naegleria gruberi genomic scaffold NAEGRscaffold_39, whole genome
             shotgun sequence
          Length = 371401

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 25/105 (23%), Positives = 47/105 (44%), Gaps = 6/105 (5%)
 Frame = -2

Query: 81    DTENMTPEQVEARSVAMERARKKL--QDRHDAAAREHEERLR----EQEEQKRMQKINDH 134
             + E    ++ EAR    E  RKK   +DR   A  E +ER R    E++E+KR  ++ + 
Sbjct: 26082 EQEEKKRQEEEARRKKDEEDRKKKEEEDRLRKAQLEEDERKRKAQLEEDERKRKAQLEED 25903

Query: 135   DALKAGKTQSKTSKKLDQKPDPNQATQSHIKRNKESKPLRSSDFS 179
             +  +  + + +  ++   K +  +  +   K  +E K    S  S
Sbjct: 25902 ERKRKAQIEEEERRR---KAELEEEERRRAKEEEEKKNAELSQMS 25777



 Score = 29.6 bits (65), Expect = 1.9
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = -1

Query: 30    YVMMSVFNQGLAFLQAYGWFLLFGFVAAMFVWTNIEKSVKNLFGR 74
             ++++S+FN+G  +L  +G F         F W NI K   + FGR
Sbjct: 40222 WIILSIFNKGKNWLCNFGGF---------FFWWNISKFAHDKFGR 40115


>gb|GG738863.1| Naegleria gruberi genomic scaffold NAEGRscaffold_19, whole genome shotgun
              sequence
          Length = 467654

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 22/87 (25%), Positives = 41/87 (47%)
 Frame = -2

Query: 85     MTPEQVEARSVAMERARKKLQDRHDAAAREHEERLREQEEQKRMQKINDHDALKAGKTQS 144
              +TP++++   V+ E   +K  +  + A  E  E   E+ E+ +  ++         K +S
Sbjct: 381478 LTPDRMKKIPVSKEVEEEKPNENTETAEEEVVEEQDEEGEESQKTEV---------KKKS 381326

Query: 145    KTSKKLDQKPDPNQATQSHIKRNKESK 171
              K  KKL Q+    +   S +K+  ESK
Sbjct: 381325 KPKKKLSQEQYHKKNYVSQLKQFLESK 381245


>gb|GG738856.1| Naegleria gruberi genomic scaffold NAEGRscaffold_12, whole genome shotgun
              sequence
          Length = 602266

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 26/126 (20%), Positives = 59/126 (46%), Gaps = 16/126 (12%)
 Frame = +3

Query: 69     KNLFGRRKTYYDDTENMTPEQVEARSVAMERARKKLQDRHDAAAREHEERLREQEEQKRM 128
              K L    +   ++ E +  EQ +     +ER R++ +DR    A E E  +   EEQ+++
Sbjct: 291138 KRLEEEERFRQEEEERLRKEQED-----LERQRQEEEDRIKREAEEQERLIHAAEEQEKL 291302

Query: 129    Q-KINDHDALKAGKTQSKTSKKLDQK----------PDPNQATQSHIKRNKE-----SKP 172
              + +  + D ++A + + +  K+ +++             ++ +Q  + + +E      KP
Sbjct: 291303 RIEQEERDKVEAERLKIEQEKREEEERILKAQKVIDDKRSERSQKLVDKMEEFWARFGKP 291482

Query: 173    LRSSDF 178
              L+S +F
Sbjct: 291483 LKSKEF 291500



 Score = 27.7 bits (60), Expect = 7.3
 Identities = 25/114 (21%), Positives = 50/114 (43%)
 Frame = -3

Query: 67    SVKNLFGRRKTYYDDTENMTPEQVEARSVAMERARKKLQDRHDAAAREHEERLREQEEQK 126
             S   +FG++ T+ D+  +       + S   E  + +  + ++     +E  +R +    
Sbjct: 58961 SSPEIFGKKVTFGDNESSGV-----SNSDTDEEGKNRSTNTNNGGETNNESVMRTEPI-- 58803

Query: 127   RMQKINDHDALKAGKTQSKTSKKLDQKPDPNQATQSHIKRNKESKPLRSSDFSP 180
                KI D  + ++ KTQS T K   +KP+      + +  N++ K   SS  +P
Sbjct: 58802 ---KIPDRKS-RSKKTQSNTKKIHSKKPNHLSVDPNSLDENRKLKMKNSSGSTP 58653


>gb|GG738925.1| Naegleria gruberi genomic scaffold NAEGRscaffold_81, whole genome
             shotgun sequence
          Length = 182562

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 21/84 (25%), Positives = 35/84 (41%)
 Frame = -2

Query: 92    ARSVAMERARKKLQDRHDAAAREHEERLREQEEQKRMQKINDHDALKAGKTQSKTSKKLD 151
             ++ +   R +++ + R     R    RL   + +K   K N + + K  K  SK SKK  
Sbjct: 34040 SQRITTRRMKRERKSRPRRIIRMTPRRLNPNQSKK---KSNKNQSKKLNKKLSKKSKKKR 33870

Query: 152   QKPDPNQATQSHIKRNKESKPLRS 175
              +P P        K  K   PL++
Sbjct: 33869 NQPLPQSPNHLA*KSKKHLMPLKN 33798


>gb|GG738889.1| Naegleria gruberi genomic scaffold NAEGRscaffold_45, whole genome
             shotgun sequence
          Length = 348446

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 25/88 (28%), Positives = 42/88 (47%)
 Frame = -3

Query: 74    RRKTYYDDTENMTPEQVEARSVAMERARKKLQDRHDAAAREHEERLREQEEQKRMQKIND 133
             R+K Y    +   PE+ + R  A ++ RK+ Q R     +E E+R     ++K+ QK   
Sbjct: 38988 RKKRY----QRKQPEEEKRRL*ATKKLRKRNQKRR----QEEEKRRLPVMKRKKNQK--- 38842

Query: 134   HDALKAGKTQSKTSKKLDQKPDPNQATQ 161
              + LK  +T+    KK  +K +  Q  Q
Sbjct: 38841 REELKERRTKVMKRKKSQRKQEERQQLQ 38758



 Score = 28.1 bits (61), Expect = 5.6
 Identities = 15/56 (26%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
 Frame = +2

Query: 113    REHEERLREQEEQK----RMQKINDHDALKAGKTQSKTSKKLDQKPDPNQATQSHI 164
              RE+ ER R+Q+E++    R QK+++ +  K  + + +  K    K +  +  Q H+
Sbjct: 215975 RENMERDRKQQEEREKLERKQKVSEEEKKKKEEKKDQIEKYKQIKEEKQKLKQKHL 216142


>gb|GG738866.1| Naegleria gruberi genomic scaffold NAEGRscaffold_22, whole genome shotgun
              sequence
          Length = 469335

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 30/151 (19%), Positives = 60/151 (39%), Gaps = 3/151 (1%)
 Frame = +1

Query: 25     INENPYVMMSVFNQGLAFLQAYGWFLLFGFVAAMFVWTNIEKSVKNLFGRRKTYYD-DTE 83
              I  +  ++  + N+ L  +QA    L F    +  + T+ EK V  L  +  T  D +TE
Sbjct: 418489 IQNSEQILKKLNNRSLKKIQA----LSFTNGQSEELVTSSEKDVLQLLAKNHTKQDKNTE 418656

Query: 84     NMTPEQVEARSVAMERARKKLQDRHDAAAREHEERLREQEEQKRMQKINDHDALKAGKTQ 143
                  E+   +    ++ ++K  ++H+                 + +K+N+          
Sbjct: 418657 KGVKEEKNTKKEKNDKKQEKSAEKHE-----------------KEKKVNNISEPSVSTIP 418785

Query: 144    SKTSKKLDQKP--DPNQATQSHIKRNKESKP 172
              +KTS + D KP   PN+ +         ++P
Sbjct: 418786 TKTSNRNDSKPFASPNEKSSDEDSEETSNEP 418878


>gb|GG738855.1| Naegleria gruberi genomic scaffold NAEGRscaffold_11, whole genome shotgun
              sequence
          Length = 613270

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 25/115 (21%), Positives = 51/115 (44%), Gaps = 5/115 (4%)
 Frame = -3

Query: 80     DDTENMTPEQVEARSVAMERARKKLQDRHDAAAREHEERLREQEEQKRMQKINDHDALKA 139
              D+T   T +Q     V ++ A K  +++   AA+ HE  ++E + Q+ ++     +A++ 
Sbjct: 450419 DETRYNTLKQKSNDLVKVKNAEKDAEEKKKVAAQVHENIMKEMQYQEELRDYQYLNAIRQ 450240

Query: 140    GKTQSKT-----SKKLDQKPDPNQATQSHIKRNKESKPLRSSDFSPLGGGPSNSA 189
                +  +T     S+ LD+         SH+   K    +R+ D + +     N A
Sbjct: 450239 FISVYRTYFIAGSQALDE-------LASHLITGKSRTAMRNYDVNDITNYKDNVA 450096


>gb|GG739363.1| Naegleria gruberi genomic scaffold NAEGRscaffold_863, whole genome
           shotgun sequence
          Length = 1635

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 15/57 (26%), Positives = 30/57 (52%)
 Frame = +3

Query: 113 REHEERLREQEEQKRMQKINDHDALKAGKTQSKTSKKLDQKPDPNQATQSHIKRNKE 169
           R+   R+R++E+  + +KINDHD   +   +      + ++ D  QA+ S  K  ++
Sbjct: 936 RKLTRRIRKEEKTCKKKKINDHDETPSEIDEEVIILTIQKQLDEEQASSSIRKGRRQ 1106


>gb|GG738930.1| Naegleria gruberi genomic scaffold NAEGRscaffold_86, whole genome shotgun
              sequence
          Length = 158571

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = +2

Query: 26     NENPYVMMSVFNQGLAFLQAYGWFLLFGFVAAMFV-WTNIEKSVK 69
              N   YV  ++   G  F + +GWFLL   + + FV + N  K+VK
Sbjct: 126698 NNG*YVQFNLHG*GAHFEEFHGWFLLIDSIVSYFVKYYNYCKNVK 126832


>gb|GG738909.1| Naegleria gruberi genomic scaffold NAEGRscaffold_65, whole genome shotgun
              sequence
          Length = 250472

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 26/97 (26%), Positives = 42/97 (43%), Gaps = 5/97 (5%)
 Frame = -3

Query: 109    DAAAREHEERLREQEEQKRMQKINDHDALKAGKTQSKTSKKLD-QKPDPNQATQSHIKRN 167
              D ++   EE++ ++E +KRMQK+     LK      KTS     Q     Q+T   ++ N
Sbjct: 188667 DESSSSEEEQISKEELEKRMQKV---AKLKEVINNEKTSMNYQLQNVYKEQSTNISLENN 188497

Query: 168    ----KESKPLRSSDFSPLGGGPSNSARWRPGNSRPSA 200
                  K  +   +S  +     PSNS      N+  S+
Sbjct: 188496 ENDLKRKREQPNSSSTTTNTTPSNSQSSSSNNTSASS 188386



 Score = 28.9 bits (63), Expect = 3.3
 Identities = 21/74 (28%), Positives = 34/74 (45%)
 Frame = +1

Query: 126    KRMQKINDHDALKAGKTQSKTSKKLDQKPDPNQATQSHIKRNKESKPLRSSDFSPLGGGP 185
              K +Q +N+ + ++A     +TSK  D+  +P   T++  KR    +P    +       P
Sbjct: 106276 KLIQFLNNKNKMRAFVIVDETSKTKDRCSNPLPKTKAPNKRKATQQPDYCHNIFQWHSAP 106455

Query: 186    SNSARWRPGNSRPS 199
              SNS      NSR S
Sbjct: 106456 SNSMVNNFNNSRES 106497


>gb|GG738906.1| Naegleria gruberi genomic scaffold NAEGRscaffold_62, whole genome shotgun
              sequence
          Length = 286411

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 28/121 (23%), Positives = 51/121 (42%), Gaps = 7/121 (5%)
 Frame = +2

Query: 64     IEKSVKNLFGRRKTYYDDTENMTPEQVEARSVAMERARKK-----LQDRHDAAAREHEER 118
              + K  + L     T   +   ++ E+   R  A+E+ +++     LQ   +    + E+ 
Sbjct: 250781 LRKENEELKNALTTLQQEISEISKEKDLERKRAVEKVKQEYQKQLLQTNSEIDKMKKEKE 250960

Query: 119    LREQEEQKRMQKINDHDAL--KAGKTQSKTSKKLDQKPDPNQATQSHIKRNKESKPLRSS 176
              + EQEEQK   K+        K  +     SK L +K    +A +   K   E+K LR+ 
Sbjct: 250961 VSEQEEQKSSAKLKSQQYFERKQQEMSLNLSKALREK---EEAIKERNKLLNEAKELRTE 251131

Query: 177    D 177
              +
Sbjct: 251132 N 251134



 Score = 28.5 bits (62), Expect = 4.3
 Identities = 20/74 (27%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
 Frame = -3

Query: 83     ENMTPEQVEARSVAMERARKKLQDRHDAAAREHEERLREQEEQ-KRMQKIN--DHDALKA 139
              E    +Q+EA        RKK  D +D   +E E++ +E+EE+ ++ Q+I   + D  + 
Sbjct: 186092 EEQERKQIEALKTEKALQRKKKID-NDKKLKEVEKKKKEEEERIRKEQEIKRIEEDKRRK 185916

Query: 140    GKTQSKTSKKLDQK 153
               + + K  + ++QK
Sbjct: 185915 QQEEEKLKRDMEQK 185874



 Score = 28.1 bits (61), Expect = 5.6
 Identities = 23/109 (21%), Positives = 49/109 (44%), Gaps = 7/109 (6%)
 Frame = +2

Query: 76    KTYYDDTENMTPEQVEARSVAMERARKKLQDRHDAAAR-------EHEERLREQEEQKRM 128
             K   D  EN+  E+V   S+  ++  K+LQ++    A+        +EER +  EEQK++
Sbjct: 62513 KVLRDQIENLRKERVVFDSI-YKKMEKELQEKKKEMAKIIELSNSAYEERGQALEEQKQV 62689

Query: 129   QKINDHDALKAGKTQSKTSKKLDQKPDPNQATQSHIKRNKESKPLRSSD 177
             +  +  +  K  + + +  + L +     +  Q      +E +   ++D
Sbjct: 62690 KDEHQKEIEKIEEEREQLDRLLKEAEKVTEKLQQRELERREREIQEAAD 62836


>gb|GG738901.1| Naegleria gruberi genomic scaffold NAEGRscaffold_57, whole genome shotgun
              sequence
          Length = 309005

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 19/84 (22%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
 Frame = +3

Query: 88     EQVEARSVAMERARKKLQDRHDAAAREHEERLREQEEQK-RMQKINDHDALKAGKTQSKT 146
              EQ++      + ++KKL+   +A  +  ++ + + EEQ+ R+  +N+H   +  K  +  
Sbjct: 286674 EQLKKDLEGEKDSKKKLETEKNALEQSRKKLIDDLEEQRNRLDTMNNH-MNQLEKELNDR 286850

Query: 147    SKKLDQKPDPNQATQSHIKRNKES 170
               ++L++    N    S I RN ++
Sbjct: 286851 KRELERSQKDNDDKDSEITRNTQA 286922


>gb|GG738897.1| Naegleria gruberi genomic scaffold NAEGRscaffold_53, whole genome shotgun
              sequence
          Length = 326913

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
 Frame = -3

Query: 132    NDHDALKAGKTQSKTSKKLDQKPDPNQA--TQSHIKRNKESKPLRSSDFSPLGGGPSNSA 189
              N+    K    Q +++KKL   P PN A    + + R K  KP   S  + + G    S 
Sbjct: 175375 NNKQKKKHKNKQKQSAKKLAPPPTPNSAPPVPTSLGRKKIRKPNSLSSMNDIDGKEEVSY 175196

Query: 190    RWRPGN 195
                 PGN
Sbjct: 175195 LTSPGN 175178


>gb|GG738871.1| Naegleria gruberi genomic scaffold NAEGRscaffold_27, whole genome shotgun
              sequence
          Length = 417575

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = +3

Query: 133    DHDALKAGKTQSKTSKKLDQKPDPNQATQSHIKRNKESKPLRSS 176
              D++ LK   T  ++ +K D  P P Q     I + K +KP+ S+
Sbjct: 342006 DNNVLKRVNTSDRSDRK-DSTPSPTQNNPKKISKPKRAKPVLST 342134


>gb|GG738848.1| Naegleria gruberi genomic scaffold NAEGRscaffold_4, whole genome shotgun
              sequence
          Length = 712659

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 24/112 (21%), Positives = 45/112 (40%), Gaps = 7/112 (6%)
 Frame = -2

Query: 65     EKSVKNLFGRRKTYYDDTENMTPEQVEARSVAMERARKKLQDRHDAAARE-------HEE 117
              E+  KN    +K  ++  E+   E VE      +   KK +  H+   +E       HEE
Sbjct: 267086 EEKEKNDHEEKKDIHNHDEDKK-ENVEKH----DHEEKKDKHNHEKEVKEENVEKHVHEE 266922

Query: 118    RLREQEEQKRMQKINDHDALKAGKTQSKTSKKLDQKPDPNQATQSHIKRNKE 169
              + +   E+ + +K+  HD  +  +      KK + K D     +   K+  +
Sbjct: 266921 KDKHNHEEVKEEKVEIHDREEKKEKHDHEEKKNELKHDEKVEEEKEEKKKHD 266766



 Score = 27.7 bits (60), Expect = 7.3
 Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 5/80 (6%)
 Frame = +1

Query: 42     FLQAYGWFLLFGFVAAMFVWTNIEKSV-----KNLFGRRKTYYDDTENMTPEQVEARSVA 96
              +LQ Y W   +G +   +V +   K V     K L    KTY ++ EN   E+ ++R   
Sbjct: 242629 YLQRYIWICFYGGLY*NYVDSTRGKLVVVVQQKILNHLTKTYINNLENTLNEEDKSRLPV 242808

Query: 97     MERARKKLQDRHDAAAREHE 116
               +  RKK   +  +A+R +E
Sbjct: 242809 FQEERKKEIKKLLSASRINE 242868


>gb|GG738865.1| Naegleria gruberi genomic scaffold NAEGRscaffold_21, whole genome shotgun
              sequence
          Length = 820293

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 27/114 (23%), Positives = 46/114 (40%), Gaps = 6/114 (5%)
 Frame = +2

Query: 81     DTENMTPEQVEARSVAMERARKKLQDRHDAAAREHEERLREQEEQKRMQK------INDH 134
              D E++    VEA SVA E   K+L    D   ++ +  L+E++E+  + K          
Sbjct: 281873 DGESIDETSVEATSVAEEALHKRLL-AQDETIQQLQAELKEKKEELELLKQAGESVTGQV 282049

Query: 135    DALKAGKTQSKTSKKLDQKPDPNQATQSHIKRNKESKPLRSSDFSPLGGGPSNS 188
              +  K  K   +   K++     NQ  Q  I   +++K         L   P+ S
Sbjct: 282050 EKEKHEKEIERLQDKINTIESENQTYQKMISVLEDTKEKLKEKVKSLKSKPNES 282211


>gb|GG738851.1| Naegleria gruberi genomic scaffold NAEGRscaffold_7, whole genome shotgun
              sequence
          Length = 693645

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 14/63 (22%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
 Frame = +1

Query: 101    RKKLQDRHDAAAREHEERLREQEEQKRMQKIND--HDALKAGKTQSKTSKKLDQKPDPNQ 158
              ++++++ +D  +R +++  R  +++   Q +N   HD     K  +K  K L++KP  ++
Sbjct: 168568 QQEIEESYDNVSRNNDQENRLTKKKHFQQHLNKSKHDNRLQQKELAKLKKNLEKKPILSE 168747

Query: 159    ATQ 161
              +T+
Sbjct: 168748 STE 168756


>gb|GG738910.1| Naegleria gruberi genomic scaffold NAEGRscaffold_66, whole genome shotgun
              sequence
          Length = 243952

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 5/78 (6%)
 Frame = +3

Query: 97     MERARKKLQDRHDAAAREHEERLREQEEQKRMQKINDHDALKAGKTQSKTSK-KLDQ--- 152
              +E  RK   +RH     E    +R     ++ +K N  D L   KTQ  T + K++Q   
Sbjct: 167508 LENQRKTQSERHRIELEELRTEMRNFTISQKAEKENLLDLLDNTKTQLDTCQHKMEQMQL 167687

Query: 153    -KPDPNQATQSHIKRNKE 169
               + D  +  Q   KRN E
Sbjct: 167688 ERSDGQKEVQYLRKRNSE 167741


>gb|GG739004.1| Naegleria gruberi genomic scaffold NAEGRscaffold_169, whole genome
            shotgun sequence
          Length = 11051

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 17/51 (33%), Positives = 22/51 (43%)
 Frame = +1

Query: 114  EHEERLREQEEQKRMQKINDHDALKAGKTQSKTSKKLDQKPDPNQATQSHI 164
            +HE   RE  E K  Q+I DH        +  T++K  Q      A  SHI
Sbjct: 4189 QHELPSREFFESKYQQRIEDHYIETKQTFEENTAQKTKQNRFQTPAQPSHI 4341


>gb|GG738969.1| Naegleria gruberi genomic scaffold NAEGRscaffold_125, whole genome
            shotgun sequence
          Length = 16833

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 23/115 (20%), Positives = 47/115 (40%)
 Frame = -3

Query: 61   WTNIEKSVKNLFGRRKTYYDDTENMTPEQVEARSVAMERARKKLQDRHDAAAREHEERLR 120
            W   EKS K    RRK    +    + ++        +R RK+ + +     R+ ++R R
Sbjct: 1432 WKWKEKSKKQRKRRRKWKRRENSKRSKQR-------SKRKRKRKRKKKKKKRRKRKKRRR 1274

Query: 121  EQEEQKRMQKINDHDALKAGKTQSKTSKKLDQKPDPNQATQSHIKRNKESKPLRS 175
             ++ +K+ + +      +    +S   KK  ++       +S  KR    K L++
Sbjct: 1273 RKKRRKKRRNLRK----RRNSKRSN*KKKKKRRNKRKNKNESKTKRRNSKKKLKT 1121


>gb|GG738913.1| Naegleria gruberi genomic scaffold NAEGRscaffold_69, whole genome
             shotgun sequence
          Length = 236320

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
 Frame = -3

Query: 65    EKSVKNLFGRRKTYYDDTENM-TPEQVEARSVAMERARKKLQDRHDAAAREHEERLREQE 123
             E+ VK L    +   D T++M T + +EAR   +E+ +           R+HEER+R+ E
Sbjct: 16079 EEEVKEL---ERIMSDLTDSMVTNKSLEARLQDIEKEK-----------RDHEERIRQME 15942

Query: 124   EQK 126
             E++
Sbjct: 15941 EER 15933


>gb|GG738908.1| Naegleria gruberi genomic scaffold NAEGRscaffold_64, whole genome shotgun
              sequence
          Length = 259034

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = +2

Query: 48     WFLLFGFVAAMFVWTNIEKSVKNLFGRRKTYYDDTEN 84
              WF+  GF      W+N    V NL G  K++  DT+N
Sbjct: 149426 WFVT-GFTNGRKAWSNSVVHVSNLLGPVKSWKMDTQN 149533


>gb|GG738853.1| Naegleria gruberi genomic scaffold NAEGRscaffold_9, whole genome shotgun
              sequence
          Length = 695587

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
 Frame = -3

Query: 128    MQKINDHDALKAGKTQSKTSKKLDQKPDP-NQATQSHIK 165
              ++K+N +  LK+ +T+    + L+Q P+P N   QS IK
Sbjct: 474980 LRKLNSNKKLKSHQTKPIPKRTLNQNPNPKNLKKQSQIK 474864


  Database: N.gruberi/genome.fa
    Posted date:  Feb 9, 2011  9:02 AM
  Number of letters in database: 40,964,085
  Number of sequences in database:  784
  
Lambda     K      H
   0.312    0.129    0.375 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,138,284
Number of Sequences: 784
Number of extensions: 81458
Number of successful extensions: 547
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 86
Number of HSP's successfully gapped in prelim test: 46
Number of HSP's that attempted gapping in prelim test: 329
Number of HSP's gapped (non-prelim): 397
length of query: 204
length of database: 13,654,695
effective HSP length: 97
effective length of query: 107
effective length of database: 13,578,647
effective search space: 1452915229
effective search space used: 1452915229
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 59 (27.3 bits)